| 1 | - | | 28 | Movistar Team | 09:19:20 |
| 2 | (3) | | 32 | Sky Procycling | " |
| 3 | (1) | | 24 | EPM - UNE | " |
| 4 | (6) | | 29 | Euskaltel - Euskadi | " |
| 5 | (1) | | 34 | Team Saxo Bank - SunGard | " |
| 6 | (3) | | 28 | Caja Rural | " |
| 7 | - | | 26 | Saur - Sojasun | " |
| 8 | (13) | | 25 | Caja Rural | " |
| 9 | (6) | | 28 | Team Saxo Bank - SunGard | " |
| 10 | (8) | | 33 | Barbot - Efapel | " |
| 11 | (14) | | 35 | Movistar Team | " |
| 12 | (4) | | 24 | Euskaltel - Euskadi | " |
| 13 | (1) | | 22 | Colombia es Pasion - Cafe de Colombia | " |
| 14 | (2) | | 26 | Barbot - Efapel | " |
| 15 | (19) | | 30 | Barbot - Efapel | " |
| 16 | (4) | | 25 | Colnago - CSF Inox | " |
| 17 | (4) | | 29 | EPM - UNE | " |
| 18 | (4) | | 29 | Andalucia Caja Granada | " |
| 19 | (2) | | 24 | Rabobank | " |
| 20 | (9) | | 25 | Barbot - Efapel | " |
| 21 | (3) | | 24 | Saur - Sojasun | " |
| 22 | (19) | | 22 | Geox - TMC | " |
| 23 | (4) | | 27 | Barbot - Efapel | " |
| 24 | (8) | | 27 | Colombia es Pasion - Cafe de Colombia | " |
| 25 | (17) | | 23 | Orbea Continental | " |
| 26 | (5) | | 32 | Movistar Team | " |
| 27 | (21) | | 22 | Andalucia Caja Granada | " |
| 28 | (2) | | 26 | Sky Procycling | " |
| 29 | (1) | | 28 | Euskaltel - Euskadi | " |
| 30 | (4) | | 36 | Saur - Sojasun | " |
| 31 | (4) | | 26 | Euskaltel - Euskadi | " |
| 32 | (21) | | 22 | Orbea Continental | " |
| 33 | (10) | | 22 | Burgos 2016 - Castilla y Leon | " |
| 34 | (1) | | 21 | Orbea Continental | " |
| 35 | (1) | | 24 | EPM - UNE | + 06 |
| 36 | (2) | | 27 | Movistar Team | " |
| 37 | (7) | | 30 | Rabobank | " |
| 38 | (1) | | 21 | Sky Procycling | " |
| 39 | (13) | | 23 | Rabobank | " |
| 40 | (9) | | 26 | Euskaltel - Euskadi | " |
| 41 | (1) | | 29 | Saur - Sojasun | " |
| 42 | (5) | | 23 | Colombia es Pasion - Cafe de Colombia | " |
| 43 | (5) | | 36 | Sky Procycling | " |
| 44 | (1) | | 27 | Sky Procycling | " |
| 45 | (2) | | 25 | Andalucia Caja Granada | " |
| 46 | (5) | | 28 | Colombia es Pasion - Cafe de Colombia | " |
| 47 | (12) | | 24 | Colnago - CSF Inox | " |
| 48 | (12) | | 34 | Rabobank | " |
| 49 | (7) | | 21 | Colombia es Pasion - Cafe de Colombia | " |
| 50 | (3) | | 25 | Andalucia Caja Granada | " |
| 51 | (14) | | 25 | EPM - UNE | " |
| 52 | (2) | | 22 | Euskaltel - Euskadi | " |
| 53 | (21) | | 28 | Burgos 2016 - Castilla y Leon | " |
| 54 | (5) | | 28 | Colnago - CSF Inox | " |
| 55 | (8) | | 35 | Andalucia Caja Granada | " |
| 56 | (5) | | 25 | Saur - Sojasun | " |
| 57 | (31) | | 26 | Team Saxo Bank - SunGard | " |
| 58 | (14) | | 25 | Caja Rural | " |
| 59 | (7) | | 27 | Colombia es Pasion - Cafe de Colombia | " |
| 60 | (9) | | 21 | Geox - TMC | " |
| 61 | (3) | | 21 | Caja Rural | " |
| 62 | (16) | | 18 | Burgos 2016 - Castilla y Leon | " |
| 63 | (18) | | 29 | Movistar Team | " |
| 64 | (15) | | 23 | Burgos 2016 - Castilla y Leon | " |
| 65 | (5) | | 31 | Geox - TMC | " |
| 66 | (4) | | 26 | Saur - Sojasun | " |
| 67 | (17) | | 34 | Barbot - Efapel | " |
| 68 | (10) | | 25 | Colnago - CSF Inox | " |
| 69 | (8) | | 36 | Colombia es Pasion - Cafe de Colombia | " |
| 70 | (6) | | 35 | EPM - UNE | " |
| 71 | (4) | | 30 | EPM - UNE | " |
| 72 | (6) | | 26 | EPM - UNE | " |
| 73 | (13) | | 35 | Geox - TMC | " |
| 74 | (7) | | 28 | Colombia es Pasion - Cafe de Colombia | " |
| 75 | (5) | | 28 | EPM - UNE | " |
| 76 | (7) | | 24 | Geox - TMC | " |
| 77 | (9) | | 30 | EPM - UNE | " |
| 78 | (6) | | 29 | Team Saxo Bank - SunGard | " |
| 79 | (10) | | 25 | Caja Rural | + 17 |
| 80 | (25) | | 25 | Sky Procycling | + 26 |
| 81 | (9) | | 25 | Barbot - Efapel | + 47 |
| 82 | (40) | | 21 | Burgos 2016 - Castilla y Leon | + 48 |
| 83 | (8) | | 31 | Caja Rural | + 52 |
| 84 | (1) | | 21 | Andalucia Caja Granada | + 01:14 |
| 85 | (7) | | 22 | Sky Procycling | + 01:28 |
| 86 | (15) | | 23 | Colnago - CSF Inox | + 01:38 |
| 87 | (4) | | 34 | Team Saxo Bank - SunGard | " |
| 88 | (17) | | 22 | Burgos 2016 - Castilla y Leon | + 01:40 |
| 89 | (6) | | 28 | Euskaltel - Euskadi | " |
| 90 | (3) | | 21 | Rabobank | " |
| 91 | (8) | | 24 | Movistar Team | " |
| 92 | (4) | | 36 | Andalucia Caja Granada | " |
| 93 | (10) | | 27 | Team Saxo Bank - SunGard | " |
| 94 | (37) | | 25 | Colnago - CSF Inox | + 01:42 |
| 95 | (2) | | 26 | Caja Rural | + 01:58 |
| 96 | (21) | | 33 | Andalucia Caja Granada | + 02:06 |
| 97 | (15) | | 24 | Caja Rural | " |
| 98 | (11) | | 32 | Team Saxo Bank - SunGard | " |
| 99 | (9) | | 25 | Orbea Continental | + 02:21 |
| 100 | (6) | | 21 | Orbea Continental | + 02:31 |
| 101 | (6) | | 21 | Colnago - CSF Inox | + 03:02 |
| 102 | (11) | | 22 | Geox - TMC | + 03:04 |
| 103 | (9) | | 23 | Sky Procycling | " |
| 104 | (6) | | 28 | Rabobank | " |
| 105 | (13) | | 28 | Movistar Team | " |
| 106 | (8) | | 25 | Movistar Team | + 03:12 |
| 107 | (6) | | 21 | Orbea Continental | + 03:40 |
| 108 | (4) | | 22 | Orbea Continental | " |
| 109 | - | | 27 | Rabobank | + 03:50 |
| 110 | (10) | | 29 | Geox - TMC | + 04:12 |
| 111 | (5) | | 25 | Saur - Sojasun | + 04:36 |
| 112 | (3) | | 23 | Barbot - Efapel | + 05:04 |
| 113 | (11) | | 23 | Burgos 2016 - Castilla y Leon | + 05:53 |
| 114 | - | | 26 | Euskaltel - Euskadi | + 05:56 |
| 115 | (9) | | 22 | Orbea Continental | + 06:07 |
| 116 | (5) | | 32 | Rabobank | + 06:09 |