| 1 | | 21 | Euskaltel - Euskadi | 04:00:20 |
| 2 | | 30 | Geox - TMC | + 03 |
| 3 | | 32 | Katusha Team | + 12 |
| 4 | | 29 | Katusha Team | + 17 |
| 5 | | 26 | Saur - Sojasun | + 33 |
| 6 | | 23 | Colombia es Pasion - Cafe de Colombia | + 01:10 |
| 7 | | 33 | Euskaltel - Euskadi | + 01:14 |
| 8 | | 27 | Euskaltel - Euskadi | + 01:28 |
| 9 | | 27 | Movistar Team | + 01:29 |
| 10 | | 28 | Euskaltel - Euskadi | + 01:58 |
| 11 | | 20 | FDJ | + 02:00 |
| 12 | | 30 | Movistar Team | + 02:03 |
| 13 | | 35 | Andalucia Caja Granada | + 02:08 |
| 14 | | 31 | Movistar Team | + 02:09 |
| 15 | | 35 | Movistar Team | + 02:10 |
| 16 | | 29 | Colombia es Pasion - Cafe de Colombia | + 02:25 |
| 17 | | 20 | Skil - Shimano | + 03:03 |
| 18 | | 28 | Colombia es Pasion - Cafe de Colombia | + 03:04 |
| 19 | | 36 | Geox - TMC | + 03:50 |
| 20 | | 21 | Androni Giocattoli | + 04:36 |
| 21 | | 30 | Katusha Team | + 04:58 |
| 22 | | 28 | Katusha Team | " |
| 23 | | 29 | Katusha Team | + 05:04 |
| 24 | | 25 | Caja Rural | + 05:37 |
| 25 | | 21 | Movistar Team | " |
| 26 | | 31 | Euskaltel - Euskadi | + 05:54 |
| 27 | | 25 | Andalucia Caja Granada | + 06:13 |
| 28 | | 30 | Saur - Sojasun | + 06:31 |
| 29 | | 24 | Topsport Vlaanderen - Mercator | + 07:01 |
| 30 | | 29 | Acqua & Sapone | + 08:03 |
| 31 | | 21 | Androni Giocattoli | + 08:05 |
| 32 | | 33 | Geox - TMC | + 08:07 |
| 33 | | 30 | Geox - TMC | " |
| 34 | | 23 | Orbea Continental | + 08:09 |
| 35 | | 26 | FDJ | " |
| 36 | | 21 | Orbea Continental | " |
| 37 | | 42 | Caja Rural | + 08:24 |
| 38 | | 24 | Caja Rural | " |
| 39 | | 29 | Andalucia Caja Granada | " |
| 40 | | 27 | Caja Rural | " |
| 41 | | 22 | Caja Rural | " |
| 42 | | 31 | Euskaltel - Euskadi | + 08:40 |
| 43 | | 37 | Acqua & Sapone | + 08:53 |
| 44 | | 25 | Colombia es Pasion - Cafe de Colombia | + 09:15 |
| 45 | | 21 | Geox - TMC | + 09:24 |
| 46 | | 21 | Geox - TMC | " |
| 47 | | 20 | Caja Rural | + 09:38 |
| 48 | | 21 | Burgos 2016 - Castilla y Leon | + 09:50 |
| 49 | | 21 | Euskaltel - Euskadi | + 10:17 |
| 50 | | 34 | Euskaltel - Euskadi | " |
| 51 | | 28 | Burgos 2016 - Castilla y Leon | + 10:39 |
| 52 | | 25 | Saur - Sojasun | + 10:44 |
| 53 | | 32 | Acqua & Sapone | + 11:44 |
| 54 | | 21 | Orbea Continental | + 11:46 |
| 55 | | 25 | Andalucia Caja Granada | + 12:50 |
| 56 | | 20 | Burgos 2016 - Castilla y Leon | + 13:49 |
| 57 | | 25 | Saur - Sojasun | " |
| 58 | | 24 | FDJ | " |
| 59 | | 23 | Katusha Team | " |
| 60 | | 39 | FDJ | " |
| 61 | | 32 | Topsport Vlaanderen - Mercator | " |
| 62 | | 29 | Movistar Team | " |
| 63 | | 26 | FDJ | " |
| 64 | | 18 | Burgos 2016 - Castilla y Leon | " |
| 65 | | 32 | Geox - TMC | + 13:52 |
| 66 | | 26 | Androni Giocattoli | " |
| 67 | | 23 | Orbea Continental | " |
| 68 | | 22 | Skil - Shimano | " |
| 69 | | 25 | Orbea Continental | " |
| 70 | | 24 | Geox - TMC | " |
| 71 | | 29 | Andalucia Caja Granada | " |
| 72 | | 21 | Saur - Sojasun | " |
| 73 | | 22 | Orbea Continental | " |
| 74 | | 27 | Skil - Shimano | " |
| 75 | | 27 | Skil - Shimano | " |
| 76 | | 22 | Colombia es Pasion - Cafe de Colombia | + 14:04 |
| 77 | | 23 | Androni Giocattoli | + 14:09 |
| 78 | | 22 | Orbea Continental | + 14:48 |
| 79 | | 40 | Androni Giocattoli | + 14:49 |
| 80 | | 29 | Topsport Vlaanderen - Mercator | + 15:04 |
| 81 | | 25 | Topsport Vlaanderen - Mercator | + 15:06 |
| 82 | | 26 | Topsport Vlaanderen - Mercator | + 15:08 |
| 83 | | 23 | Burgos 2016 - Castilla y Leon | " |
| 84 | | 28 | FDJ | + 16:56 |
| 85 | | 21 | Andalucia Caja Granada | + 17:02 |
| 86 | | 22 | Topsport Vlaanderen - Mercator | + 18:05 |
| 87 | | 31 | Androni Giocattoli | + 21:07 |
| 88 | | 30 | Androni Giocattoli | + 21:22 |
| DNF | | 39 | Movistar Team | |
| DNF | | 37 | Colombia es Pasion - Cafe de Colombia | |
| DNF | | 34 | Androni Giocattoli | |
| DNF | | 38 | Acqua & Sapone | |
| DNF | | 37 | Katusha Team | |
| DNF | | 38 | Acqua & Sapone | |
| DNF | | 31 | Katusha Team | |
| DNF | | 25 | Movistar Team | |
| DNF | | 22 | Skil - Shimano | |
| DNF | | 23 | Orbea Continental | |
| DNF | | 26 | Skil - Shimano | |
| DNF | | 22 | Burgos 2016 - Castilla y Leon | |
| DNF | | 22 | Burgos 2016 - Castilla y Leon | |
| DNF | | 23 | Skil - Shimano | |
| DNF | | 25 | Caja Rural | |
| DNF | | 24 | Acqua & Sapone | |
| DNF | | 22 | Andalucia Caja Granada | |
| DNF | | 25 | Caja Rural | |
| DNF | | 24 | Skil - Shimano | |
| DNF | | 27 | Saur - Sojasun | |
| DNF | | 26 | Saur - Sojasun | |
| DNF | | 32 | Colombia es Pasion - Cafe de Colombia | |
| DNF | | 28 | Colombia es Pasion - Cafe de Colombia | |
| DNF | | 31 | Saur - Sojasun | |
| DNF | | 28 | Acqua & Sapone | |
| DNF | | 30 | Acqua & Sapone | |
| DNF | | 27 | FDJ | |