| 1 | | 32 | Miche | 04:29:40 |
| 2 | | 26 | Caja Rural | " |
| 3 | | 33 | UnitedHealthcare Pro Cycling | + 04 |
| 4 | | 25 | Caja Rural | + 14 |
| 5 | | 26 | UnitedHealthcare Pro Cycling | + 16 |
| 6 | | 29 | LA - Antarte | + 18 |
| 7 | | 25 | Andalucia Caja Granada | + 19 |
| 8 | | 31 | Movistar Team | " |
| 9 | | 21 | | + 21 |
| 10 | | 27 | Barbot - Efapel | " |
| 11 | | 36 | Geox - TMC | + 31 |
| 12 | | 24 | KTM - Murcia | + 33 |
| 13 | | 24 | Caja Rural | " |
| 14 | | 25 | Barbot - Efapel | + 36 |
| 15 | | 29 | Onda | " |
| 16 | | 30 | EPM - UNE | + 44 |
| 17 | | 29 | Geox - TMC | + 51 |
| 18 | | 21 | | + 55 |
| 19 | | 29 | Miche | + 01:12 |
| 20 | | 30 | Miche | + 01:16 |
| 21 | | 21 | Orbea Continental | + 01:42 |
| 22 | | 28 | EPM - UNE | + 01:50 |
| 23 | | 25 | EPM - UNE | " |
| 24 | | 30 | EPM - UNE | " |
| 25 | | 29 | Euskaltel - Euskadi | " |
| 26 | | 23 | Onda | " |
| 27 | | 20 | Burgos 2016 - Castilla y Leon | " |
| 28 | | 25 | LA - Antarte | " |
| 29 | | 27 | Movistar Team | + 02:00 |
| 30 | | 21 | Geox - TMC | + 02:21 |
| 31 | | 31 | UnitedHealthcare Pro Cycling | + 02:31 |
| 32 | | 21 | Orbea Continental | + 03:02 |
| 33 | | 45 | | " |
| 34 | | 20 | | " |
| 35 | | 31 | LA - Antarte | + 03:13 |
| 36 | | 19 | | + 03:29 |
| 37 | | 22 | | " |
| 38 | | 22 | LA - Antarte | + 03:34 |
| 39 | | 34 | Barbot - Efapel | + 03:37 |
| 40 | | 33 | Barbot - Efapel | " |
| 41 | | 23 | Orbea Continental | + 03:40 |
| 42 | | 29 | LA - Antarte | + 03:54 |
| 43 | | 29 | Andalucia Caja Granada | + 04:28 |
| 44 | | 24 | Movistar Team | " |
| 45 | | 23 | Euskaltel - Euskadi | " |
| 46 | | 25 | Onda | " |
| 47 | | 34 | LA - Antarte | " |
| 48 | | 29 | Andalucia Caja Granada | + 07:37 |
| 49 | | 25 | Andalucia Caja Granada | " |
| 50 | | 21 | Orbea Continental | " |
| 51 | | 23 | Orbea Continental | " |
| 52 | | 26 | UnitedHealthcare Pro Cycling | " |
| 53 | | 29 | UnitedHealthcare Pro Cycling | + 07:40 |
| 54 | | 30 | EPM - UNE | + 08:17 |
| 55 | | 32 | Movistar Team | " |
| 56 | | 26 | Barbot - Efapel | " |
| 57 | | 29 | EPM - UNE | " |
| 58 | | 26 | EPM - UNE | " |
| 59 | | 19 | | " |
| 60 | | 33 | Andalucia Caja Granada | " |
| 61 | | 32 | Movistar Team | " |
| 62 | | 30 | Barbot - Efapel | " |
| 63 | | 25 | Barbot - Efapel | " |
| 64 | | 23 | | " |
| 65 | | 24 | Miche | " |
| 66 | | 31 | Euskaltel - Euskadi | " |
| 67 | | 21 | Orbea Continental | " |
| 68 | | 25 | LA - Antarte | " |
| 69 | | 19 | | " |
| 70 | | 25 | Orbea Continental | " |
| 71 | | 24 | Barbot - Efapel | " |
| 72 | | 28 | Burgos 2016 - Castilla y Leon | " |
| 73 | | 22 | Caja Rural | + 10:35 |
| 74 | | 41 | Caja Rural | + 15:08 |
| 75 | | | | " |
| 76 | | 23 | Onda | " |
| 77 | | 31 | Caja Rural | + 15:10 |
| DNF | | 32 | UnitedHealthcare Pro Cycling | |
| DNF | | 28 | Onda | |
| DNF | | 29 | | |
| DNF | | 33 | UnitedHealthcare Pro Cycling | |
| DNF | | 23 | | |
| DNF | | 22 | | |
| DNF | | 28 | Caja Rural | |
| DNF | | 26 | Euskaltel - Euskadi | |
| DNF | | 20 | Andalucia Caja Granada | |
| DNF | | 31 | Burgos 2016 - Castilla y Leon | |
| DNF | | 26 | Caja Rural | |
| DNF | | 21 | | |
| DNF | | 27 | | |
| DNF | | 34 | Onda | |
| DNF | | 28 | Onda | |
| DNF | | 29 | Movistar Team | |
| DNF | | 23 | Andalucia Caja Granada | |
| DNF | | 23 | Burgos 2016 - Castilla y Leon | |
| DNF | | 25 | Onda | |
| DNF | | 24 | EPM - UNE | |
| DNF | | | | |
| DNF | | 29 | Miche | |
| DNF | | 33 | Miche | |
| DNF | | 31 | Miche | |