| 1 | - | | 26 | Caja Rural | 17:02:23 |
| 2 | - | | 32 | Miche | + 13 |
| 3 | - | | 27 | Barbot - Efapel | + 36 |
| 4 | - | | 29 | LA - Antarte | + 52 |
| 5 | - | | 31 | Movistar Team | + 01:45 |
| 6 | - | | 25 | EPM - UNE | + 01:57 |
| 7 | - | | 25 | Caja Rural | + 02:22 |
| 8 | - | | 26 | UnitedHealthcare Pro Cycling | + 04:05 |
| 9 | (1) | | 29 | Miche | + 04:16 |
| 10 | (1) | | 30 | EPM - UNE | + 04:24 |
| 11 | - | | 23 | Euskaltel - Euskadi | + 04:44 |
| 12 | (1) | | 29 | Onda | " |
| 13 | (1) | | 28 | EPM - UNE | + 04:54 |
| 14 | - | | 33 | Barbot - Efapel | + 05:06 |
| 15 | - | | 25 | Barbot - Efapel | + 05:23 |
| 16 | (1) | | 26 | EPM - UNE | + 07:49 |
| 17 | (1) | | 19 | | + 07:50 |
| 18 | - | | 29 | EPM - UNE | + 08:52 |
| 19 | - | | 23 | Onda | + 09:09 |
| 20 | - | | 25 | Andalucia Caja Granada | + 09:13 |
| 21 | - | | 24 | Caja Rural | + 11:05 |
| 22 | - | | 30 | Miche | + 11:55 |
| 23 | - | | 21 | | + 11:56 |
| 24 | - | | 22 | | + 12:30 |
| 25 | - | | 29 | Movistar Team | + 12:56 |
| 26 | - | | 24 | KTM - Murcia | + 13:09 |
| 27 | (2) | | 29 | Euskaltel - Euskadi | + 13:30 |
| 28 | (3) | | 29 | UnitedHealthcare Pro Cycling | + 13:38 |
| 29 | (2) | | 31 | UnitedHealthcare Pro Cycling | + 13:41 |
| 30 | - | | 23 | Orbea Continental | + 14:05 |
| 31 | (3) | | 27 | Movistar Team | + 14:07 |
| 32 | - | | 24 | Movistar Team | + 14:38 |
| 33 | - | | 30 | EPM - UNE | + 15:49 |
| 34 | - | | 19 | | + 16:02 |
| 35 | - | | 28 | Onda | + 17:38 |
| 36 | - | | 31 | LA - Antarte | + 18:06 |
| 37 | - | | 32 | Movistar Team | + 18:49 |
| 38 | - | | 23 | | + 19:02 |
| 39 | (1) | | 21 | | + 21:11 |
| 40 | (3) | | 25 | Orbea Continental | + 22:05 |
| 41 | (1) | | 25 | Onda | + 22:08 |
| 42 | (1) | | 24 | Barbot - Efapel | + 22:43 |
| 43 | (2) | | 36 | Geox - TMC | + 23:51 |
| 44 | (3) | | 29 | Geox - TMC | + 24:08 |
| 45 | (1) | | 34 | Barbot - Efapel | + 24:09 |
| 46 | (2) | | 25 | LA - Antarte | + 24:25 |
| 47 | (2) | | 20 | Andalucia Caja Granada | + 25:45 |
| 48 | (2) | | 30 | Barbot - Efapel | + 25:53 |
| 49 | (2) | | 22 | | + 26:03 |
| 50 | (4) | | 28 | Burgos 2016 - Castilla y Leon | + 27:01 |
| 51 | (4) | | 34 | LA - Antarte | + 27:20 |
| 52 | - | | 22 | Caja Rural | + 27:26 |
| 53 | (3) | | 29 | LA - Antarte | " |
| 54 | (3) | | 21 | Geox - TMC | + 28:40 |
| 55 | (3) | | 20 | Burgos 2016 - Castilla y Leon | + 28:45 |
| 56 | (4) | | 21 | | + 29:14 |
| 57 | (4) | | 32 | Movistar Team | + 29:44 |
| 58 | (19) | | 25 | Barbot - Efapel | " |
| 59 | (5) | | 21 | Orbea Continental | + 30:26 |
| 60 | (2) | | 20 | | + 30:47 |
| 61 | (2) | | 41 | Caja Rural | + 31:18 |
| 62 | (3) | | 29 | Andalucia Caja Granada | + 32:06 |
| 63 | (4) | | 45 | | + 34:03 |
| 64 | (4) | | 31 | Euskaltel - Euskadi | + 34:54 |
| 65 | (12) | | 31 | Caja Rural | + 35:06 |
| 66 | (7) | | 22 | LA - Antarte | + 37:00 |
| 67 | (2) | | 23 | Andalucia Caja Granada | + 37:10 |
| 68 | (2) | | 33 | UnitedHealthcare Pro Cycling | + 41:17 |
| 69 | (3) | | 26 | Euskaltel - Euskadi | + 41:29 |
| 70 | (1) | | 26 | UnitedHealthcare Pro Cycling | + 42:10 |
| 71 | (1) | | 25 | Andalucia Caja Granada | + 42:30 |
| 72 | (2) | | 32 | UnitedHealthcare Pro Cycling | + 43:56 |
| 73 | - | | 26 | Barbot - Efapel | + 44:04 |
| 74 | (1) | | 34 | Onda | + 44:24 |
| 75 | (1) | | 25 | Onda | + 44:57 |
| 76 | (1) | | | | + 45:06 |
| 77 | (1) | | 21 | Orbea Continental | + 46:07 |
| 78 | (1) | | 29 | Andalucia Caja Granada | + 46:27 |
| 79 | (2) | | 23 | Orbea Continental | + 47:13 |
| 80 | (2) | | 21 | Orbea Continental | " |
| 81 | (1) | | 24 | Miche | + 49:23 |
| 82 | (1) | | 19 | | + 49:57 |
| 83 | (1) | | 29 | Miche | + 50:01 |
| 84 | (1) | | 31 | Miche | + 50:54 |
| 85 | (3) | | 30 | EPM - UNE | + 53:51 |
| 86 | (3) | | 24 | EPM - UNE | + 54:19 |
| 87 | - | | 28 | Onda | + 54:51 |
| 88 | (3) | | 33 | Andalucia Caja Granada | + 56:56 |
| 89 | (6) | | 33 | UnitedHealthcare Pro Cycling | + 58:52 |
| 90 | (4) | | 25 | LA - Antarte | + 59:23 |
| 91 | (6) | | 33 | Miche | + 01:00:12 |
| 92 | (6) | | 21 | Orbea Continental | + 01:00:44 |
| 93 | (6) | | 28 | Caja Rural | + 01:01:33 |
| 94 | (4) | | 27 | LA - Antarte | + 01:02:42 |
| 95 | (2) | | 23 | | + 01:03:00 |
| 96 | (4) | | 23 | Onda | + 01:05:44 |
| 97 | (1) | | | | + 01:06:42 |
| 98 | (4) | | 29 | | + 01:07:15 |
| 99 | (1) | | 23 | Burgos 2016 - Castilla y Leon | + 01:08:22 |
| 100 | (1) | | 31 | Burgos 2016 - Castilla y Leon | + 01:08:38 |
| 101 | (1) | | 26 | Caja Rural | + 01:10:52 |