| 1 | - | | 22 | | 08:11:59 |
| 2 | - | | 22 | Singapore | + 05 |
| 3 | - | | 23 | Nusantara | + 10 |
| 4 | - | | 27 | | + 14 |
| 5 | - | | 27 | | + 20 |
| 6 | - | | 32 | Kelapa Gading Bikers | + 28 |
| 7 | - | | 25 | Go For Gold Philippines | + 29 |
| 8 | - | | 24 | Terengganu Cycling Team | + 37 |
| 9 | - | | 25 | Kelapa Gading Bikers | + 42 |
| 10 | (2) | | 25 | Go For Gold Philippines | + 48 |
| 11 | (2) | | 31 | Terengganu Cycling Team | " |
| 12 | (2) | | 25 | Terengganu Cycling Team | " |
| 13 | (2) | | 19 | | " |
| 14 | (1) | | 30 | | + 56 |
| 15 | (1) | | 21 | | " |
| 16 | (15) | | 29 | Malaysia Pro Cycling | + 01:05 |
| 17 | (3) | | 20 | | + 01:10 |
| 18 | (6) | | 25 | | " |
| 19 | (3) | | 19 | | " |
| 20 | (3) | | 22 | Malaysia Pro Cycling | " |
| 21 | - | | 19 | | " |
| 22 | (6) | | 26 | Kelapa Gading Bikers | " |
| 23 | (3) | | 21 | | " |
| 24 | (3) | | 22 | Nusantara | " |
| 25 | (7) | | 36 | Terengganu Cycling Team | + 01:11 |
| 26 | (8) | | 19 | | + 01:18 |
| 27 | (10) | | 21 | | " |
| 28 | (10) | | 24 | | " |
| 29 | (13) | | 23 | Go For Gold Philippines | " |
| 30 | (9) | | 21 | Nusantara | " |
| 31 | (12) | | 22 | | " |
| 32 | (9) | | 23 | | " |
| 33 | (11) | | | | " |
| 34 | (15) | | 20 | | " |
| 35 | (12) | | 28 | Malaysia Pro Cycling | " |
| 36 | (18) | | 21 | Kelapa Gading Bikers | + 01:21 |
| 37 | (8) | | 23 | Go For Gold Philippines | " |
| 38 | (12) | | 23 | | + 01:23 |
| 39 | (6) | | 27 | Terengganu Cycling Team | + 01:26 |
| 40 | (4) | | 20 | | + 01:27 |
| 41 | (4) | | 36 | | " |
| 42 | (2) | | 24 | Malaysia Pro Cycling | + 01:29 |
| 43 | (5) | | 20 | | " |
| 44 | (10) | | 26 | | + 01:30 |
| 45 | (7) | | 22 | | + 01:32 |
| 46 | (5) | | 30 | Malaysia Pro Cycling | + 01:34 |
| 47 | (17) | | 19 | Singapore | + 01:37 |
| 48 | (8) | | 24 | Nusantara | + 01:41 |
| 49 | (11) | | 20 | | + 15:39 |
| 50 | (31) | | 24 | Kelapa Gading Bikers | + 17:55 |
| 51 | (6) | | 19 | | + 21:31 |
| 52 | (17) | | 23 | | + 22:19 |
| 53 | (5) | | 31 | | + 26:04 |