| 1 | | 24 | Team Bridgestone Cycling | 04:01:08 |
| 2 | | 38 | Utsunomiya Blitzen | " |
| 3 | | 26 | Kinan Racing Team | " |
| 4 | | 22 | Team Bridgestone Cycling | + 31 |
| 5 | | 35 | Kinan Racing Team | " |
| 6 | | 36 | Kinan Racing Team | " |
| 7 | | 24 | Ef Education - Nippo Development Team | " |
| 8 | | 46 | Matrix Powertag | " |
| 9 | | 28 | Nasu Blasen | + 01:50 |
| 10 | | 25 | Matrix Powertag | + 05:53 |
| 11 | | 27 | Utsunomiya Blitzen | " |
| 12 | | 26 | Asian Racing Team | " |
| 13 | | 27 | Ef Education - Nippo Development Team | " |
| 14 | | 22 | Nasu Blasen | " |
| 15 | | 20 | | " |
| 16 | | 27 | Nasu Blasen | " |
| 17 | | 36 | Matrix Powertag | + 05:55 |
| 18 | | 28 | Asian Racing Team | " |
| 19 | | 23 | Ef Education - Nippo Development Team | " |
| 20 | | 24 | Asian Racing Team | + 08:07 |
| 21 | | 25 | Shimano Racing | " |
| 22 | | 27 | Shimano Racing | " |
| 23 | | 20 | | " |
| 24 | | 22 | Nasu Blasen | " |
| 25 | | | | " |
| 26 | | 36 | Asian Racing Team | " |
| 27 | | 27 | Kinan Racing Team | " |
| 28 | | 33 | Matrix Powertag | " |
| 29 | | 36 | Utsunomiya Blitzen | + 08:11 |
| 30 | | 26 | Shimano Racing | " |
| 31 | | | | + 08:13 |
| 32 | | 22 | Team Bridgestone Cycling | + 11:50 |
| 33 | | | | " |
| 34 | | 24 | | + 15:33 |
| 35 | | 30 | Kinan Racing Team | + 16:15 |
| 36 | | 27 | | " |
| 37 | | 28 | Nasu Blasen | " |
| 38 | | | | " |
| 39 | | | | + 16:51 |
| 40 | | | | " |
| 41 | | 30 | Utsunomiya Blitzen | + 16:53 |
| 42 | | 20 | | + 16:57 |
| 43 | | 24 | Asian Racing Team | + 17:00 |
| 44 | | 33 | Team Bridgestone Cycling | + 17:06 |
| 45 | | 30 | Nasu Blasen | + 19:05 |
| 46 | | 30 | Shimano Racing | " |
| 47 | | 21 | | " |
| 48 | | | | " |
| OTL | | 19 | | |
| OTL | | 20 | | |
| OTL | | 23 | Shimano Racing | |