| 1 | - | | 33 | Discovery Channel | 55:58:17 |
| 2 | - | | 31 | Rabobank | + 01:41 |
| 3 | (1) | | 27 | Team CSC | + 02:46 |
| 4 | (4) | | 31 | Team T-Mobile | + 04:34 |
| 5 | (1) | | 31 | Gerolsteiner | + 04:45 |
| 6 | (4) | | 29 | Phonak Hearing Systems | + 05:03 |
| 7 | - | | 29 | Illes Balears - Caisse d'Epargne | " |
| 8 | (1) | | 30 | Team T-Mobile | + 05:38 |
| 9 | (2) | | 31 | Team T-Mobile | + 07:09 |
| 10 | (7) | | 34 | Crédit Agricole | + 08:37 |
| 11 | (1) | | 28 | Liberty Seguros - Würth | + 08:52 |
| 12 | (1) | | 28 | Davitamon-Lotto | + 09:14 |
| 13 | (1) | | 25 | Discovery Channel | + 09:59 |
| 14 | (8) | | 34 | Gerolsteiner | + 10:39 |
| 15 | (6) | | 28 | Euskaltel - Euskadi | + 11:43 |
| 16 | - | | 33 | Team CSC | + 11:54 |
| 17 | (2) | | 25 | Crédit Agricole | + 12:55 |
| 18 | (1) | | 30 | Team CSC | + 13:53 |
| 19 | - | | 31 | Lampre - Caffita | + 14:06 |
| 20 | (6) | | 32 | Liquigas - Bianchi | + 17:12 |
| 21 | (3) | | 26 | Française des Jeux | + 19:15 |
| 22 | (5) | | 33 | Saunier Duval - Prodir | + 19:52 |
| 23 | (1) | | 35 | Team T-Mobile | + 20:07 |
| 24 | (6) | | 27 | Phonak Hearing Systems | + 24:40 |
| 25 | (2) | | 32 | Discovery Channel | + 24:59 |
| 26 | (7) | | 28 | Illes Balears - Caisse d'Epargne | + 27:47 |
| 27 | (7) | | 25 | Quick Step - Innergetic | + 29:51 |
| 28 | (23) | | 32 | Phonak Hearing Systems | + 32:12 |
| 29 | (6) | | 33 | Rabobank | + 32:54 |
| 30 | (5) | | 31 | Discovery Channel | + 33:42 |
| 31 | (5) | | 25 | Ag2r Prevoyance | + 34:33 |
| 32 | (3) | | 32 | Discovery Channel | + 37:10 |
| 33 | (4) | | 24 | Domina Vacanze | + 37:24 |
| 34 | - | | 28 | Team T-Mobile | + 37:27 |
| 35 | (4) | | 22 | Liberty Seguros - Würth | + 40:12 |
| 36 | (8) | | 33 | Saunier Duval - Prodir | + 43:44 |
| 37 | (9) | | 37 | Bouygues Telecom | + 50:15 |
| 38 | (3) | | 31 | Phonak Hearing Systems | + 51:43 |
| 39 | (7) | | 35 | Ag2r Prevoyance | + 51:56 |
| 40 | - | | 32 | Davitamon-Lotto | + 53:15 |
| 41 | (3) | | 31 | Liberty Seguros - Würth | + 57:33 |
| 42 | (7) | | 29 | Domina Vacanze | + 57:59 |
| 43 | (9) | | 29 | Crédit Agricole | + 59:45 |
| 44 | (1) | | 31 | Crédit Agricole | + 01:00:38 |
| 45 | (8) | | 24 | Illes Balears - Caisse d'Epargne | + 01:01:52 |
| 46 | (2) | | 32 | Discovery Channel | + 01:02:18 |
| 47 | (17) | | 32 | Phonak Hearing Systems | + 01:02:26 |
| 48 | (14) | | 34 | Cofidis | + 01:04:26 |
| 49 | (1) | | 32 | Liberty Seguros - Würth | + 01:06:05 |
| 50 | (11) | | 30 | Cofidis | + 01:07:35 |
| 51 | (23) | | 25 | Illes Balears - Caisse d'Epargne | + 01:08:44 |
| 52 | (32) | | 32 | Bouygues Telecom | + 01:09:28 |
| 53 | (2) | | 27 | Euskaltel - Euskadi | + 01:09:32 |
| 54 | (13) | | 29 | Saunier Duval - Prodir | + 01:10:21 |
| 55 | (1) | | 25 | Bouygues Telecom | " |
| 56 | (14) | | 31 | Liberty Seguros - Würth | + 01:10:25 |
| 57 | - | | 27 | Euskaltel - Euskadi | + 01:12:50 |
| 58 | (23) | | 32 | Team T-Mobile | + 01:13:06 |
| 59 | (1) | | 24 | Quick Step - Innergetic | + 01:13:11 |
| 60 | (13) | | 26 | Team T-Mobile | + 01:13:45 |
| 61 | (16) | | 28 | Liberty Seguros - Würth | + 01:16:04 |
| 62 | (11) | | 27 | Rabobank | + 01:17:47 |
| 63 | (3) | | 25 | Fassa Bortolo | + 01:17:50 |
| 64 | (14) | | 27 | Liquigas - Bianchi | + 01:18:09 |
| 65 | (2) | | 30 | Fassa Bortolo | + 01:18:46 |
| 66 | (4) | | 28 | Davitamon-Lotto | + 01:20:21 |
| 67 | (6) | | 34 | Illes Balears - Caisse d'Epargne | + 01:21:01 |
| 68 | (17) | | 26 | Ag2r Prevoyance | + 01:22:42 |
| 69 | (13) | | 31 | Cofidis | + 01:22:43 |
| 70 | (5) | | 26 | Cofidis | + 01:23:09 |
| 71 | (13) | | 21 | Française des Jeux | + 01:23:44 |
| 72 | (6) | | 25 | Gerolsteiner | + 01:23:53 |
| 73 | (6) | | 30 | Saunier Duval - Prodir | + 01:24:21 |
| 74 | (18) | | 23 | Française des Jeux | + 01:26:46 |
| 75 | (7) | | 27 | Team T-Mobile | + 01:27:10 |
| 76 | (17) | | 32 | Lampre - Caffita | + 01:27:23 |
| 77 | (12) | | 34 | Gerolsteiner | + 01:28:18 |
| 78 | (7) | | 27 | Fassa Bortolo | + 01:31:21 |
| 79 | (18) | | 26 | Ag2r Prevoyance | + 01:31:32 |
| 80 | (3) | | 27 | Gerolsteiner | + 01:31:33 |
| 81 | (1) | | 24 | Rabobank | + 01:32:05 |
| 82 | (13) | | 34 | Bouygues Telecom | + 01:33:55 |
| 83 | (11) | | 30 | Team CSC | + 01:35:00 |
| 84 | (11) | | 30 | Liquigas - Bianchi | + 01:35:12 |
| 85 | (2) | | 26 | Bouygues Telecom | + 01:36:10 |
| 86 | (12) | | 26 | Crédit Agricole | + 01:37:12 |
| 87 | (11) | | 29 | Française des Jeux | + 01:37:39 |
| 88 | (7) | | 28 | Fassa Bortolo | + 01:38:03 |
| 89 | (19) | | 21 | Domina Vacanze | + 01:38:17 |
| 90 | (3) | | 34 | Team T-Mobile | + 01:39:09 |
| 91 | (9) | | 24 | Rabobank | + 01:39:23 |
| 92 | (8) | | 25 | Gerolsteiner | + 01:41:55 |
| 93 | (4) | | 28 | Euskaltel - Euskadi | + 01:43:29 |
| 94 | (4) | | 24 | Française des Jeux | + 01:43:44 |
| 95 | (4) | | 26 | Euskaltel - Euskadi | + 01:44:12 |
| 96 | (10) | | 34 | Discovery Channel | + 01:44:26 |
| 97 | (9) | | 25 | Lampre - Caffita | + 01:44:31 |
| 98 | (5) | | 27 | Domina Vacanze | + 01:45:19 |
| 99 | (5) | | 21 | Liberty Seguros - Würth | + 01:48:39 |
| 100 | (1) | | 36 | Lampre - Caffita | + 01:52:36 |
| 101 | (4) | | 30 | Ag2r Prevoyance | + 01:53:12 |
| 102 | (6) | | 26 | Discovery Channel | + 01:53:19 |
| 103 | (2) | | 30 | Phonak Hearing Systems | + 01:53:51 |
| 104 | (2) | | 30 | Davitamon-Lotto | + 01:56:40 |
| 105 | (14) | | 30 | Française des Jeux | + 01:57:20 |
| 106 | (4) | | 30 | Team CSC | + 01:57:33 |
| 107 | (4) | | 26 | Saunier Duval - Prodir | + 01:59:25 |
| 108 | (4) | | 36 | Team CSC | + 01:59:43 |
| 109 | (2) | | 25 | Bouygues Telecom | + 02:00:29 |
| 110 | (10) | | 30 | Lampre - Caffita | + 02:02:28 |
| 111 | (2) | | 28 | Euskaltel - Euskadi | + 02:04:06 |
| 112 | (2) | | 27 | Crédit Agricole | + 02:09:45 |
| 113 | (1) | | 31 | Cofidis | + 02:09:58 |
| 114 | (3) | | 28 | Team CSC | + 02:10:26 |
| 115 | (1) | | 30 | Liquigas - Bianchi | + 02:11:04 |
| 116 | (3) | | 28 | Crédit Agricole | + 02:11:42 |
| 117 | (1) | | 24 | Liberty Seguros - Würth | + 02:13:01 |
| 118 | (16) | | 29 | Bouygues Telecom | + 02:13:43 |
| 119 | (2) | | 32 | Cofidis | + 02:14:23 |
| 120 | (5) | | 34 | Rabobank | + 02:15:57 |
| 121 | (5) | | 23 | Bouygues Telecom | " |
| 122 | (2) | | 26 | Quick Step - Innergetic | + 02:16:00 |
| 123 | (6) | | 31 | Davitamon-Lotto | + 02:16:14 |
| 124 | (1) | | 29 | Lampre - Caffita | + 02:17:44 |
| 125 | (3) | | 23 | Fassa Bortolo | + 02:18:29 |
| 126 | (3) | | 24 | Domina Vacanze | + 02:19:14 |
| 127 | (1) | | 24 | Ag2r Prevoyance | + 02:20:29 |
| 128 | (1) | | 30 | Cofidis | + 02:20:30 |
| 129 | (1) | | 35 | Gerolsteiner | + 02:20:40 |
| 130 | (4) | | 26 | Bouygues Telecom | + 02:22:00 |
| 131 | (4) | | 25 | Saunier Duval - Prodir | + 02:23:26 |
| 132 | (3) | | 33 | Domina Vacanze | + 02:24:04 |
| 133 | (2) | | 33 | Davitamon-Lotto | + 02:25:13 |
| 134 | (2) | | 30 | Liquigas - Bianchi | + 02:25:47 |
| 135 | (2) | | 24 | Fassa Bortolo | + 02:25:49 |
| 136 | - | | 33 | Liquigas - Bianchi | + 02:26:51 |
| 137 | - | | 24 | Française des Jeux | + 02:27:14 |
| 138 | - | | 36 | Rabobank | + 02:27:23 |
| 139 | - | | 25 | Euskaltel - Euskadi | + 02:28:07 |
| 140 | (3) | | 32 | Quick Step - Innergetic | + 02:28:10 |
| 141 | (3) | | 31 | Crédit Agricole | + 02:28:12 |
| 142 | (2) | | 26 | Française des Jeux | + 02:28:50 |
| 143 | (5) | | 25 | Ag2r Prevoyance | + 02:29:10 |
| 144 | (3) | | 33 | Cofidis | + 02:30:23 |
| 145 | (3) | | 28 | Liquigas - Bianchi | + 02:30:44 |
| 146 | - | | 24 | Liquigas - Bianchi | + 02:31:59 |
| 147 | - | | 31 | Gerolsteiner | + 02:32:31 |
| 148 | (1) | | 32 | Illes Balears - Caisse d'Epargne | + 02:32:42 |
| 149 | (1) | | 28 | Domina Vacanze | + 02:33:19 |
| 150 | (5) | | 27 | Illes Balears - Caisse d'Epargne | + 02:37:03 |
| 151 | (7) | | 32 | Phonak Hearing Systems | + 02:37:35 |
| 152 | (1) | | 29 | Rabobank | + 02:38:21 |
| 153 | (1) | | 29 | Quick Step - Innergetic | + 02:38:22 |
| 154 | (1) | | 32 | Euskaltel - Euskadi | + 02:38:27 |
| 155 | (1) | | 27 | Gerolsteiner | + 02:39:38 |
| 156 | - | | 34 | Quick Step - Innergetic | + 02:41:36 |
| 157 | - | | 28 | Cofidis | + 02:43:08 |
| 158 | (1) | | 33 | Davitamon-Lotto | + 02:46:33 |
| 159 | (1) | | 24 | Davitamon-Lotto | + 02:47:40 |
| 160 | (1) | | 28 | Euskaltel - Euskadi | + 02:53:59 |