| 1 | | | 29 | Team Bridgestone Cycling | 50:23 |
| 2 | | | 26 | Team Bridgestone Cycling | + 01:03 |
| 3 | | | 24 | Team Ukyo | + 01:31 |
| 4 | | | 22 | Utsunomiya Blitzen | + 01:37 |
| 5 | | | 23 | Aisan Racing Team | + 01:40 |
| 6 | | | 36 | Matrix Powertag | + 01:43 |
| 7 | | | 32 | Utsunomiya Blitzen | + 02:09 |
| 8 | | | 25 | Team Bridgestone Cycling | + 02:23 |
| 9 | | | 32 | Utsunomiya Blitzen | + 02:41 |
| 10 | | | 23 | Aisan Racing Team | + 02:44 |
| 11 | | | 26 | Kinan Cycling Team | + 02:47 |
| 12 | | | 27 | | + 03:09 |
| 13 | | | | | + 03:14 |
| 14 | | | | | + 03:25 |
| 15 | | | 26 | | + 03:26 |
| 16 | | | | | + 03:41 |
| 17 | | | | | + 04:20 |
| 18 | | | 23 | | + 04:32 |
| 19 | | | 23 | Nasu Blasen | + 04:53 |
| 20 | | | 22 | Utsunomiya Blitzen | + 05:02 |
| 21 | | | 27 | | + 05:13 |
| 22 | | | | | + 05:21 |
| 23 | | | 24 | Team Bridgestone Cycling | + 05:58 |
| 24 | | | 39 | | " |
| 25 | | | | | + 06:12 |
| 26 | | | 31 | | + 06:26 |
| 27 | | | 22 | | + 07:50 |
| DNS | | | 23 | | |