| 1 | | 25 | W52 / FC Porto | 04:38:26 |
| 2 | | 30 | Efapel | " |
| 3 | | 21 | Caja Rural - Seguros RGA | + 21 |
| 4 | | 24 | Euskaltel - Euskadi | + 58 |
| 5 | | 24 | Tavfer-Measindot-Mortágua | + 01:15 |
| 6 | | 36 | Efapel | + 01:25 |
| 7 | | 37 | Euskaltel - Euskadi | " |
| 8 | | 21 | Israel Cycling Academy | + 01:27 |
| 9 | | 26 | Euskaltel - Euskadi | " |
| 10 | | 29 | Tavfer-Measindot-Mortágua | + 01:29 |
| 11 | | 34 | Radio Popular - Boavista | + 01:31 |
| 12 | | 27 | Atum General / Tavira / Maria Nova Hotel | + 01:38 |
| 13 | | 28 | Atum General / Tavira / Maria Nova Hotel | " |
| 14 | | 39 | Louletano - Loulé Concelho | + 01:47 |
| 15 | | 23 | Radio Popular - Boavista | + 01:53 |
| 16 | | 26 | Tavfer-Measindot-Mortágua | + 02:11 |
| 17 | | 35 | Radio Popular - Boavista | + 02:14 |
| 18 | | 30 | Antarte - Feirense | + 02:17 |
| 19 | | 34 | W52 / FC Porto | + 02:35 |
| 20 | | 21 | | " |
| 21 | | 26 | Burgos - BH | + 02:37 |
| 22 | | 23 | Euskaltel - Euskadi | " |
| 23 | | 30 | Radio Popular - Boavista | + 02:47 |
| 24 | | 20 | | + 03:18 |
| 25 | | 39 | Atum General / Tavira / Maria Nova Hotel | + 03:38 |
| 26 | | 24 | L.A. Alumínios / L.A. Sport | + 03:50 |
| 27 | | 21 | Caja Rural - Seguros RGA | + 04:02 |
| 28 | | 24 | W52 / FC Porto | + 04:04 |
| 29 | | 21 | Israel Cycling Academy | " |
| 30 | | 21 | Burgos - BH | + 04:06 |
| 31 | | 29 | Louletano - Loulé Concelho | + 04:10 |
| 32 | | 20 | ProTouch | + 04:18 |
| 33 | | 29 | Euskaltel - Euskadi | " |
| 34 | | 25 | Burgos - BH | + 04:21 |
| 35 | | 26 | Burgos - BH | + 04:49 |
| 36 | | 38 | Louletano - Loulé Concelho | + 04:53 |
| 37 | | 29 | Louletano - Loulé Concelho | + 05:27 |
| 38 | | 29 | Vino-Astana Motors | + 06:11 |
| 39 | | 26 | Tavfer-Measindot-Mortágua | + 07:30 |
| 40 | | 33 | Antarte - Feirense | " |
| 41 | | 24 | Radio Popular - Boavista | + 07:34 |
| 42 | | 30 | W52 / FC Porto | " |
| 43 | | 21 | Israel Cycling Academy | + 07:41 |
| 44 | | 30 | Radio Popular - Boavista | + 11:36 |
| 45 | | 33 | Radio Popular - Boavista | " |
| 46 | | 25 | Euskaltel - Euskadi | + 13:17 |
| 47 | | 28 | Burgos - BH | + 13:54 |
| 48 | | 19 | Antarte - Feirense | + 14:05 |
| 49 | | 24 | Caja Rural - Seguros RGA | + 14:46 |
| 50 | | | | + 14:48 |
| 51 | | 37 | W52 / FC Porto | + 15:24 |
| 52 | | 31 | W52 / FC Porto | + 15:27 |
| 53 | | 22 | | + 15:45 |
| 54 | | 19 | L.A. Alumínios / L.A. Sport | + 16:03 |
| 55 | | 41 | Atum General / Tavira / Maria Nova Hotel | + 16:05 |
| 56 | | 22 | Burgos - BH | + 17:29 |
| 57 | | 24 | L.A. Alumínios / L.A. Sport | + 18:28 |
| 58 | | 23 | L.A. Alumínios / L.A. Sport | " |
| 59 | | 29 | Euskaltel - Euskadi | " |
| 60 | | 26 | W52 / FC Porto | + 18:31 |
| 61 | | 26 | Atum General / Tavira / Maria Nova Hotel | + 18:32 |
| 62 | | 27 | Antarte - Feirense | + 18:34 |
| 63 | | 24 | | + 18:47 |
| 64 | | 30 | Louletano - Loulé Concelho | + 18:58 |
| 65 | | 22 | Tavfer-Measindot-Mortágua | + 19:19 |
| 66 | | 24 | Vino-Astana Motors | + 20:29 |
| 67 | | 20 | Atum General / Tavira / Maria Nova Hotel | " |
| 68 | | 22 | Vino-Astana Motors | " |
| 69 | | 19 | | + 20:40 |
| 70 | | 21 | Radio Popular - Boavista | + 21:06 |
| 71 | | 36 | W52 / FC Porto | + 21:13 |
| 72 | | 21 | Israel Cycling Academy | " |
| 73 | | 26 | Antarte - Feirense | + 21:25 |
| 74 | | 25 | | " |
| 75 | | 25 | ProTouch | + 21:26 |
| 76 | | 22 | Israel Cycling Academy | + 22:58 |
| 77 | | | | + 23:19 |
| 78 | | 31 | Tavfer-Measindot-Mortágua | + 23:32 |
| 79 | | 30 | Louletano - Loulé Concelho | " |
| 80 | | 25 | Caja Rural - Seguros RGA | + 23:35 |
| 81 | | 27 | Caja Rural - Seguros RGA | " |
| 82 | | 20 | Caja Rural - Seguros RGA | " |
| 83 | | 32 | Antarte - Feirense | + 24:02 |
| 84 | | 19 | Vino-Astana Motors | + 25:48 |
| 85 | | 21 | Israel Cycling Academy | + 26:07 |
| 86 | | 19 | Israel Cycling Academy | " |
| 87 | | 22 | Kelly / Simoldes - Udo | + 26:23 |
| 88 | | 22 | L.A. Alumínios / L.A. Sport | + 26:58 |
| 89 | | 25 | L.A. Alumínios / L.A. Sport | " |
| 90 | | 41 | L.A. Alumínios / L.A. Sport | " |
| 91 | | 20 | | + 28:14 |
| 92 | | 20 | | + 33:05 |
| 93 | | 18 | | + 36:57 |
| 94 | | 22 | ProTouch | + 37:35 |
| 95 | | 29 | Efapel | " |
| 96 | | 20 | ProTouch | + 37:36 |
| 97 | | 23 | Tavfer-Measindot-Mortágua | + 37:57 |
| 98 | | 19 | Efapel | + 40:43 |
| 99 | | 27 | | + 41:44 |